CDS
Accession Number | TCMCG007C46457 |
gbkey | CDS |
Protein Id | XP_009106649.1 |
Location | complement(join(28324791..28326293,28326403..28326516,28326661..28326789,28326877..28326953,28327038..28327191,28327298..28327495,28327904..28327975,28328044..28328193,28328321..28328398,28328544..28328657,28328817..28328870,28328966..28329124,28329265..28329357,28329480..28329596,28329895..28329997,28330070..28330254,28330367..28330441,28330515..28330598,28330949..28330996,28331114..28331161,28331464..28331643,28331727..28331780,28331869..28331910,28331989..28332087,28332161..28332295,28332380..28332556,28332652..28332695,28333162..28333240,28333350..28333463,28333536..28333640,28333744..28333884,28334067..28334135,28334209..28334312,28334430..28334478,28334692..28334784,28334874..28334994,28335476..28335579,28335944..28336021,28336110..28336199,28336342..28336407,28336486..28336578,28336663..28336890,28336971..28337117,28337197..28337505)) |
Gene | LOC103832403 |
GeneID | 103832403 |
Organism | Brassica rapa |
Protein
Length | 2091aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA249065 |
db_source | XM_009108401.3 |
Definition | nuclear-pore anchor [Brassica rapa] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGCCCTTGTTTATGCCCGACGACGAGCTCGCGCGGCTCTCCAGCGACGCCGCGTCGGTGGTCGCCGAGCGAGCCGACGAGTACATCCGCAAGCTCTACGCCGAGCTGGACAGTGTCCGCGCCAAGGCCGACGCCGCTTCCATCACGGCGGAGCAGACGTGCTCGCTTCTCGAGCAGAAGTACCTCTCGCTCTCTCGCGATTTCGCGTCGCTTGAATCTCAGAACGCGCAGCTTCAGTCCGATCTCGACGGTAGATTGGCTGAGCTCGCGCAGTCTCAGGCGGAGAAGCACCAGCTTCATTTGCAATCGATTGAGAAGGATGGAGAGTTAGAGAGGATGACGACGGAGATGTCTGAGCTTCACAAGTCCAAGAGGCAACTCATGGAGTTACTGGAGCAGAAAGATGCTGAGATTAGCGAGAAGAATTCGAATATCAAGAGCTATCTGGATAAAATCGTTAAGCTGACTGACGCCAATTCGGAGAAGGAGTCTAGATATGCTGAAGCAGGAGCAGAGTTGGCGCGTTCGCAAGCTATGTGCAGTCGTTTATCTCAGGAGAAAGAGCTCATGGAGAGGCATACGAAATGGCTTGATGAGGAGTTAACAGCCAAAGTTGATAGTTATGCTGAACTCCGTAGGAGGCATTCTGATCTTGAGGCTGAAATGTCTGCGAAGCTTGTCGATGTTGAGAAAAATTACAATGAGTGCTCTAGTTCGTTGAATTGGCATAAGGAAAGACTGAGAGAGCTGGAAGCTAAGATTACTTCACTACAAGAGGAGCTCAGCTCGTGCAAAGTTGCAGCAGCGACCATGGAAGAGCAATACAATGCTGAACTTTCTACTGCGAACAAGCTTGTTGAGCTGTACAAGGAAAGTTCGGAGGAGTGGTCCAGAAAGGCGGGTGAACTTGAGGGTGTCGTTAAGGCCTTAGAGGCACGCTTGATCCAAGTCGAGAGTGGGTACAAAGATAGTCTTGAGAAAGAAATGTCTACAAACCAGCAGCTAGAGAAGGAGAACGAAGACCTTAAACAAAAACTTGAGAAGCTTGAAGCAGAAATTGAGAAAACTAGGAAAACAAATGAGCTAACGCTTTTACCTTTCAGCAGTTTCACAAGAGGGGCAGACGATTCAGGGACCAGCAACATGATAGAGGAAAGCCATGCAATAATTTCTAAGGTTCCTGCTGGTGTGTCAGGAACGGCGCTGGCAGCTTCACTCTTACGTGATGGGTGGAGTTTGGCCAAAATTTATGAAAAGTATCAAGAGGCTGTTGATGCAATGAGACATGAGCAATTAGGTCGAAAGGAAGCTGAGTTGATACTACAACGGGTTTTATCGGAATTAGAAGAGAAAGCTGAGTTTATCCAAGAGGAAAGAGGTGAGCATGAGCGTTTGGTTGAAGCTTATTCACTAGTCAATCAAAAACTTCAGGATTCTGTATCTGAACAATCAAATATGGAGAAGTACATCATGGAGCTAAAGGCTGACTTGAGGAGACGGGAACGTGAAAATATTCTATCTCAGAAAGATATATCCGACTTACAGAAGCAGGTAACGATACTACTGAAGGAGTGCCGTGATGTCCAACTCCGCTGTGGAGCTGCCAGGGATGATGAAGAAGATGATGCTCAGCTTTCTGATGTTGAGATGGAAATGGAATCTGAAGCTGATAAAATTATTTCAGAGCATCTTTTGAAGTTTAAAGATATAAATGGACTAGTTGAGCAGAATGTTAAGCTCCGAAACCTTGTTCGTAGTCTCTCAGAGCAGATTGAAAGTAGGGAAATGGAGCTGAAGGAAATGTTTGAGACAGAGCTGAAGAAAAAGACTGATGAAGCTTCTTCGAAAGTAGCCATCGTGCTCAAAAGAGCTGAAGAGCAGGGTCAAATGATTGAATCACTTCACACATCTGTTGCAATGTATAAACGACTATATGAAGAGGAACAGAAACGTTATTCATCTAATTCTCGTTCATCAGATTTGCCTCCAGTGCCAGGAAGGAATAACTTTTTACATCTGCTTGAAGATTCACAGGAAGCTACGAAAAGAGCCCAAGAAAAAACTGTCGAACGCATCCGAAGTCTGGAAGACGATTTAGCGAAGGCTAGGAGTGAGATAATAGCGATAAGGTCTGAACGGGATAAGTTGGCCATGGAGGCAAATTTTGTTAGGGAAAAACTAGAAGGCATCATGAAAGAATCTGAACGCAAGAGAGAAGAAATGAACGGTGTTTTGGCAAGAAACATAGAGTTCTCGCAGCTGATCATCGATCACCAAAGGAAGTTACGTGAGAGTTCTGAGTCTCTGCATGCAGCGGAAGATATTTCTAGAAAATTATCAATGGAGGTTTCGGTTCTAAAACAAGAAAAAGAAGTGTTATCCAATGCTGAAAAACGAGCTTCTGATGAAGTTTCTACTCTATCTCAGAGAGTTTATCGTCTTCAGGCTACCTTGGATACTATACAGAGTACAGAGGAAGTTCGTGAGGAAGCAAGAGCTGCTGAGAGAAGGAAACAAGAGGAGCATATCAAGCAACTTGAGAAAGAATGGGCTGAAGCTAAAAAAGAATTGCAAGAAGAAAGGAGCAATTCGCGAAATAGCACTTCGGACCGCAATCAAACTTTGAACAATGCTGTTATGCAGGTCGAAGAAATGGGAAAAGAATTGGCTAATGCCTTGAAGGCTGTCTCGGCAGCAGAATCAAGGGCTTCTGTGGCTGAGGCTAGACTTTCTGATTTGGAGAAGAAGATAAGGTCTTCAGATCCTAAGGGCCTTGATATGGACAGTGGTGGAGTCGTCTCTCTTTCTGATAATGAGATGTCCGTAGAACTGCGTACTGCAAAGGAAGAAATGGAAAAGTTGAGGGGAGATGTAGAATCTAGCAAAAGCCACATGCTTCAGTACAAGAGTATAGCCCAGGTGAACGAAATTGCTTTAAAGCAAATGGAATCAGCCCATGAGAACTTCAGACTTGAGGCTGAAAAGAGACAGGAATCGTTGGAAGCAGAGCTTGTTTCTCTTAGGGAAAGGGTGTCAGAACTTGAAAACGACTGTCTACAAAAATCTGAGCAGATAACCAATGCTGCTGCAGGAAAAGAAGATGCTCTTGTATCAGCATCAGCTGAAATTGCGAGTCTGAGAGAAGAAAGCTTAGTTAAAAGTTCCCAAATCGAAGCAATGAATATCCAGATGTCCACTATGAAGGATGACTTAGGGAAGGAACATGAAAAATGGTGTGTTGCTCAGAGAAATTATGAAAGACAGGTTATTCTGCAGTCTGAAACTATTCAAGAGCTGACGAAAACATCGCAGGCTTTGGCTTCCCTTCAAGAGGAGGCATCTGAACTACGTAAATTGGCTGATTCAAGGGGAACGGAAATTTCCGAGCTTAACTCCAAGTGGAGTGAAGAGAAATGTATGCTAGAGCAGCAAAAGAATCAAGCGGAGAAGATGTATCATGAACTTAATGAACAGAACAAATTACTGCATAGCCGACTTGAGGCTATGCATCTTCGCTCGGCTGAGAAAGATAGCCGTTCTGGAAACCTATCATCTGGAAGCATTGACTCGGATCAACTTGGAGATTCTGGTTTGCAAAGTGTAGTCAATTATTTGCGCAGAACAAAGGAAATAGCTGAAACAGAAATATCACTTATGAGACAGGAAAAATTACGGTTGCAATCGCAACTTGAGAGTGCCTTGAAGATGGCAGAATCTGCCCGGGGTTCACTTAATGCTGAGCGTGCCAGTACAAGGGCCTCATTATTGACTGAGGATGAAATCAAATCTCTTCAGCTCCAGGTTAGTGAGGTGAACTTGCTCCGTGAAAGCAACATGCAACTCAGGGAAGAAAACAAACACAACTTCGAGGAGTGCCAGAGATTGCGTGAGGTAGCCCAAAAGGCTAAGACGGATTCCGAAAACTTGGAAAATCTATTGAAGCAAAAGCAAACCGAGTTAGACTTGTGTATAAGCGAGATGGAAAGGCTAAGGAAGGAGTCCGATCTTGAAAAAAAGAGGGTGGATGAGTTGAGAGAGACTTATAAAAACATTGATGTTGCTGACTACAATCGCCTCAAAGTTGAAGTGCGGCAACTCGAGGAGAAACTGAAAGCGAAAGATAATCATATTGAAGGTTTCAAGAAGCTTCTGTTAGAGAAGCAGAATAAGATATCGCAACTAGAGAAGGATCTAACAAACTGTAAAAACGATCTGAGTGAGAGGGAGAAGGATCTAACAAGATGCAAAGCCGAACTGAGTGAGAAGGAGAAAACGTTAGACTCTTCTCAGCAAGCACAGGCGACTATGGAGTCAGACTCTGAGAAGCTGAAAGCAGAGATCACAAGGGTCAAGAGATCTTATACCTTCATGAAGAAAAAGCTCGAAAAAGAAAGGGACGATTTGAACAGTGATAATCAGTCACTCTCTAAACAGTTAGAGGAAGCCAAAGAGGCTGGAAAGAGAACAACAACTGATGCTACGGTGGAGCAGGCCGTTAAGGAGAGAGATGAAAAAGAACAAAAAATTCAGATATTGGATAAATATCTTCATTCACTGAAAGATGACCTGAAGAAGAAGGATGACGAATTAACAAAAGAGAAAACAGAACGCAAGTCTGTTGAGAAGGTACTTGAAGACTCCTTGGCCAACATTAAAAAGGAGAAAACAAAAGTGGATGAAGAGCTTGTTAAGCTCGAGAGGTATCAGACGGCATTGGCTAACCTCTCTGAAGAATTGGACAAATTGAAGCAGGCGGATGGAAATCTTCCAGAGGGTACTTCAGCTGTCCAGGTTCTCTCTGGAAGCGTATTGAATGACCAAGCCGCTGCCTACGTATCAGCTGTTGACTCTTTTGAGCGCGTGGCTCGTACTTTTGTCCTCAATTCTCAAGGTAGCACCAAATCTACCGATATGGTTACTGAAGCTTCCCCTGCTACAGTTGAGCCTTCAGCCACTGCCAGAGCTTCTTCGTCAAAAGCACCGGTGGCGACTACGCAGCAGCAACTCAAAGTGAAGAGATTGACTTTGCAGAAACCAAACGCTGAACTCCGCAGAGGGAGGATTATTCGTCCCCAGCTTGGCAAACCAGAGGAACCTCCGCAAGTTGATACTGAGATGCCAGAAGCTGAAGGAGCTGGTGGTGAAGGAAAACAGCCTTCCTCCAATGTCACAGAGAGTCAAGGAACCACTGTTGTGCCGCCTGTTCAGACACATGTCCGTAAACGCCAGGCCGATTCGTTGGCTTCTGAGCCACCGCAAGCGACTCAAGGGGAAGCTAGTACCGAGATTGTACCACCTGCGTTTAAGAAGGCAAAAGGATCGGAGACAGAACCAGATACTGCCGAAGGTGAAAATCTCTCTAAAGAGCCAGACATGGATGAAACCATGGATGCTACCAATGCTGCCGAAGATGACAATGAAGAAACAGAAGCTGAGACTGCAGATGAGGAAACTATGGAAGCACAACAAGAAACTGAAGCTGAAGAAGGGCAGGATAAAACTGATGAACCAGTAGAAGAAAATCCAACCAAGACAGAAACCATCCCTACCGAAGAAGAGTTTAAGGATCAGACCGAACAAGAGAATCAAGATCTGGCAGATGCGGAATTTGATAAAGAAGAAGGCGAGCTCGATCTAGATACACTGGAAGATCTCGAAGAGCCTACGGATGTAGCTACTACACCCATGCAGTCACCTATTAGGATGGAGACAACAATGGAGGAAGCTGAAACAACCATTGAACCACCACTAGAAGATGTTAAGAACGACGAAGGAGGTGATGTAGCTGTTGAAGAAGCCTCTGATAAACCCAACAATGGTAATAATCAACAAGTAGCTGAAACCGATCTCAAGCCAGAGACCACCTCTGCATCTGCCACTCCACCCACTTCCTCTACTCCAGAAACTGAAGAAACGAAAAGAAACCGATCTCAAGTAGCAGAGACCACAGTAGCTACAACTGTCTCTGCATCTACCACTCCAGCATCTGCAGGTGCGAGCGAAACCCCAGAAACTAGTGAAGAAACGAAAAGAGCAGCGTCGCCAAGTAGGACTATTAATATAGCTGATAAAGCAAAGGAGAAAGCAGCTATAAGACAAGCCGGAGTAGCCGCTTTAGGAGGAACCCGAACTCCCTCACCAGCCAACCGAGCTCCTTCACCACCCGCTCCTAGAGGTCGTGGTCGCATTGTAAACACTCGAGGAGGCGGTCGAGTGAATTCTCGTGGTGGCCGAACCACACGCGGTGGACGTGGACCACCCCCGAGCCAGCCGTGA |
Protein: MPLFMPDDELARLSSDAASVVAERADEYIRKLYAELDSVRAKADAASITAEQTCSLLEQKYLSLSRDFASLESQNAQLQSDLDGRLAELAQSQAEKHQLHLQSIEKDGELERMTTEMSELHKSKRQLMELLEQKDAEISEKNSNIKSYLDKIVKLTDANSEKESRYAEAGAELARSQAMCSRLSQEKELMERHTKWLDEELTAKVDSYAELRRRHSDLEAEMSAKLVDVEKNYNECSSSLNWHKERLRELEAKITSLQEELSSCKVAAATMEEQYNAELSTANKLVELYKESSEEWSRKAGELEGVVKALEARLIQVESGYKDSLEKEMSTNQQLEKENEDLKQKLEKLEAEIEKTRKTNELTLLPFSSFTRGADDSGTSNMIEESHAIISKVPAGVSGTALAASLLRDGWSLAKIYEKYQEAVDAMRHEQLGRKEAELILQRVLSELEEKAEFIQEERGEHERLVEAYSLVNQKLQDSVSEQSNMEKYIMELKADLRRRERENILSQKDISDLQKQVTILLKECRDVQLRCGAARDDEEDDAQLSDVEMEMESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESREMELKEMFETELKKKTDEASSKVAIVLKRAEEQGQMIESLHTSVAMYKRLYEEEQKRYSSNSRSSDLPPVPGRNNFLHLLEDSQEATKRAQEKTVERIRSLEDDLAKARSEIIAIRSERDKLAMEANFVREKLEGIMKESERKREEMNGVLARNIEFSQLIIDHQRKLRESSESLHAAEDISRKLSMEVSVLKQEKEVLSNAEKRASDEVSTLSQRVYRLQATLDTIQSTEEVREEARAAERRKQEEHIKQLEKEWAEAKKELQEERSNSRNSTSDRNQTLNNAVMQVEEMGKELANALKAVSAAESRASVAEARLSDLEKKIRSSDPKGLDMDSGGVVSLSDNEMSVELRTAKEEMEKLRGDVESSKSHMLQYKSIAQVNEIALKQMESAHENFRLEAEKRQESLEAELVSLRERVSELENDCLQKSEQITNAAAGKEDALVSASAEIASLREESLVKSSQIEAMNIQMSTMKDDLGKEHEKWCVAQRNYERQVILQSETIQELTKTSQALASLQEEASELRKLADSRGTEISELNSKWSEEKCMLEQQKNQAEKMYHELNEQNKLLHSRLEAMHLRSAEKDSRSGNLSSGSIDSDQLGDSGLQSVVNYLRRTKEIAETEISLMRQEKLRLQSQLESALKMAESARGSLNAERASTRASLLTEDEIKSLQLQVSEVNLLRESNMQLREENKHNFEECQRLREVAQKAKTDSENLENLLKQKQTELDLCISEMERLRKESDLEKKRVDELRETYKNIDVADYNRLKVEVRQLEEKLKAKDNHIEGFKKLLLEKQNKISQLEKDLTNCKNDLSEREKDLTRCKAELSEKEKTLDSSQQAQATMESDSEKLKAEITRVKRSYTFMKKKLEKERDDLNSDNQSLSKQLEEAKEAGKRTTTDATVEQAVKERDEKEQKIQILDKYLHSLKDDLKKKDDELTKEKTERKSVEKVLEDSLANIKKEKTKVDEELVKLERYQTALANLSEELDKLKQADGNLPEGTSAVQVLSGSVLNDQAAAYVSAVDSFERVARTFVLNSQGSTKSTDMVTEASPATVEPSATARASSSKAPVATTQQQLKVKRLTLQKPNAELRRGRIIRPQLGKPEEPPQVDTEMPEAEGAGGEGKQPSSNVTESQGTTVVPPVQTHVRKRQADSLASEPPQATQGEASTEIVPPAFKKAKGSETEPDTAEGENLSKEPDMDETMDATNAAEDDNEETEAETADEETMEAQQETEAEEGQDKTDEPVEENPTKTETIPTEEEFKDQTEQENQDLADAEFDKEEGELDLDTLEDLEEPTDVATTPMQSPIRMETTMEEAETTIEPPLEDVKNDEGGDVAVEEASDKPNNGNNQQVAETDLKPETTSASATPPTSSTPETEETKRNRSQVAETTVATTVSASTTPASAGASETPETSEETKRAASPSRTINIADKAKEKAAIRQAGVAALGGTRTPSPANRAPSPPAPRGRGRIVNTRGGGRVNSRGGRTTRGGRGPPPSQP |